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RFC1 Ataxia (CANVAS): Modifiers and predictors of disease onset and severity

Written by Tala Ortiz 
Edited by Hannah Shorrock, PhD 

Repeat length in RFC1 Ataxia, also known as CANVAS, impacts the age of onset of symptoms, type of symptoms, and progression  

Are there ways to predict the types of symptoms and how a disease will progress in a complex neurogenetic disorder? Scientists have investigated this question in the context of RFC1 ataxia, which is also known as CANVAS. This disorder has a complex spectrum of symptoms experienced by patients, such as imbalance, difficulty speaking and swallowing, and tremors. RFC1 ataxia is caused by two expansions of AAGGG sequences in the replication factor C subunit 1 gene or RFC1. This research group was interested in understanding how these expansions cause the disease and if they are responsible for the varied symptoms and different combinations of symptoms experienced by patients. 

Humans have 23 pairs of chromosomes that make up our DNA. This means there are 46 total chromosomes in each cell. We receive 23 from our mom and 23 from our dad. The chromosomes’ genetic material we receive from our parents includes the same set of genes. These are the same types of genes, but they have slight differences in each copy. These differences are what make us unique human beings! These different flavors or variations of the same gene are called alleles. In the RFC1 gene, most people have the AAGGG stretch of DNA building blocks repeated 11-20 times in their cells. In the case of RCF1 ataxia, an individual receives a repeat-expanded allele from mom and a repeat-expanded allele from dad. In repeat-expanded alleles, this stretch of DNA can be repeated hundreds to thousands of times. Usually, the length of the repeat is different on each allele, and one is longer than the other. This group found that the length of the repeat impacts disease, with the length of the repeat in the shorter allele having a significant impact on disease onset and progression. 

How does the AAGGG repeat length impact disease?

The scientific group from London started with a pool of over 2000 human samples to learn about the features of RFC1 ataxia. They used sequencing techniques to parse out which patients carried the double expansion in RFC1. Then they further narrowed down the list based on the availability of clinical patient data, such as records of physical and neurological symptoms. The resulting list was 392 patients who fit the criteria. The research group used this patient information to understand modifiers of disease onset and progression in RFC1 Ataxia.  

While investigating factors that impact disease, they found that the length of the repeat is strongly associated with the age of onset of symptoms and disease progression. Since this disease is caused by expansions in RFC1 on both alleles, it is important to explore the impact of repeat size on each one. One allele usually has a longer repeat than the other one. Here, the scientists looked at the impact of the repeat length of the smaller versus the larger expansion. They found that the longer the repeat, the earlier patients first experience disease symptoms. Interestingly, this was more strongly correlated with the length of the smaller repeat than the larger one. This was also seen with the progression of the disease. The longer the repeat on the smaller allele is, the earlier in time patients would experience cough, trouble speaking, and difficulty swallowing. Additionally, it was found that a later age of symptom onset is associated with faster progression. This means patients experience symptoms sooner in the duration of their disease, but will have spent longer living without any symptoms before disease onset.  

In this study, disease presentation was categorized into three groups: sensory neuropathy, complex neuropathy, and Cerebellar Ataxia with Neuropathy and Vestibular Areflexia Syndrome (CANVAS). Sensory neuropathy refers to sensory impairment, tingling, numbness, feelings of vibration, and disrupted awareness of where one’s body is in space. Complex neuropathy involves trouble speaking and swallowing, dizziness, blurred vision, and headaches. CANVAS involves both sensory and complex neuropathy as well as cough, unsteadiness, and other issues with balance and space. By splitting the patients into these groups, the scientists found that smaller repeat lengths are associated with sensory neuropathy alone. As the repeat gets larger, patients experience more complex neurological symptoms and can advance to the full spectrum of CANVAS symptoms. 

Next, the researchers wanted to understand the impact of repeat length on degeneration of the cerebellum, a major brain region affected in CANVAS. Magnetic Resonance Imaging (MRI) was used to look at the structure of the cerebellum in patients. These images revealed that the length of the smaller allele is correlated with the volume of brain matter in the cerebellum. Individuals with larger repeats had less brain volume in the cerebellum, indicating that the cells are very sick. This trend has also been observed in previous studies.  

Can the AAGGG repeat length change?

Finally, the researchers assessed the stability of the AAGGG repeat both between generations and in different body fluids and organs within the same individual. They found that the DNA repeat is relatively stable across generations. This means the size of the DNA repeat does not change much from one generation to the next. This means that the allele an RFC1 patient inherits from their mom will be similar in length to her allele, and the same for the allele inherited from their father. This was also true of repeat length in multiple tissues in a single patient. The researchers assessed repeat instability in multiple tissues, including the brain, muscle, blood, and connective tissue cells. There was little variation in the AAGGG repeat length across multiple tissues in patients together indicating that this repeat is reasonably stable. 

It is vital to understand this type of information to help scientists work towards disease-modifying therapies. Without understanding the effect of a disease-causing mutation scientists cannot identify appropriate treatment strategies. Here we learned that a larger repeat correlates with earlier age of symptom onset, more severe disease symptoms, and decreased brain volume. This makes RFC1 Ataxia a great candidate to test if shrinking the repeat could slow down disease progression or impact the types of symptoms patients experience. This could benefit patients by reducing the number of symptoms they experience. Overall, this study gives scientists a window into the biology of RFC1 Ataxia. It provides a starting point to consider therapeutic interventions that work to mitigate disease, rather than just treat individual symptoms.  

Conflict of Interest Statement

The author and editor have no conflicts of interest to declare.

Citation of Article Reviewed

Currò R, Dominik N, Facchini S, Vegezzi E, Sullivan R, Galassi Deforie V, Fernández-Eulate G, Traschütz A, Rossi S, Garibaldi M, Kwarciany M, Taroni F, Brusco A, Good JM, Cavalcanti F, Hammans S, Ravenscroft G, Roxburgh RH; RFC1 repeat expansion study group; Parolin Schnekenberg R, Rugginini B, Abati E, Manini A, Quartesan I, Ghia A, Lòpez de Munaìn A, Manganelli F, Kennerson M, Santorelli FM, Infante J, Marques W, Jokela M, Murphy SM, Mandich P, Fabrizi GM, Briani C, Gosal D, Pareyson D, Ferrari A, Prados F, Yousry T, Khurana V, Kuo SH, Miller J, Troakes C, Jaunmuktane Z, Giunti P, Hartmann A, Basak N, Synofzik M, Stojkovic T, Hadjivassiliou M, Reilly MM, Houlden H, Cortese A. Role of the repeat expansion size in predicting age of onset and severity in RFC1 disease. Brain. 2024 May 3;147(5):1887-1898. https://pmc.ncbi.nlm.nih.gov/articles/PMC11068103/  

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